Application of molecular markers
to distinguish genetic diversity in Pinus radiata
Research Supervisors:
Dr Morley Muralitharan (Charles Sturt University),
Dr Steve Chandler (Florigene and Farrer Centre),
Sandra Heterington (ANM Forest Management and
Farrer Centre), Dr Chin-Yi (Florigene) and Dr Terry
Price (La Trobe University)
Research Staff :
Robin Mitra (Charles Sturt University)
Funding:
ARC APA(I) with ANM Forest Management as the industry partner
Duration:
1997-2000
Project Summary :
The first phase of this project was to optimise
the DNA isolation procedures in Pinus
radiata. This was carried out by screening 20 DNA isolation
methods (10 SDS and 10 CTAB) and the student has
optimised his own method to obtain pure and high yield DNA
in Pinus radiata. A manuscript based on these
results has been submitted. The next phase of this project
is to apply molecular markers to distinguish
genetic diversity in various Pinus radiata clones and families.
RAPD method has been applied to determine genetic diversity in irrigated, non-irrigated,
Dothistroma resistant, Dothistroma non-resistant, Aphid
resistant and Aphid non-resistant clones. It has shown that
the irrigated (effluent treatment from the Mill)
trees outperform non-irrigated trees in the field.
Dothistroma destroys 60% of the
photosynthetic production, therefore, the wood quality for
paper production is affected. Primers from Breastec
and Operon (120 primers were screened) produced polymorphic bands. One known parent, two
known parents and no known parent clones were used
for the genetic diversity and heritability studies using
the RAPD method. Results indicate that some polymorphisms and genetic diversity exist
within these clones. Scoring and AMOVA have been currently carried out in these clones.
Both Dothistroma resistant and
Dothistroma sensitive clones showed genetic diversity while Aphid
resistant and non-resistant clones also showed
genetic variability. Molecular marker for economic traits
such as for fibre length, straightness, brightness and
fibre diameter is being currently employed. These
traits determine the premium of the paper. Samples
from Tasmania, NSW, Victoria and South Australia
are currently being screened using RAPD analysis.
seedlings can overcome these effects. Projects on
the effects of later age silviculture on growth and
wood properties of radiata pine continued. There appears
to be some negative effects of fertiliser application
on wood density but the economic ramifications of
this finding have not been quantified as yet.
Growth response to nitrrogen application has been greater
than that to phosphorus application. It is hoped that the
P response will become apparent this year. A
sawmill study is planned to gain more knowledge
about silvicultural influences on sawing and the final
end product.
Initial studies indicated that some endogenous
factor was responsible for the seasonality of root initiation
in Pinus radiata cuttings. Carbohydrate metabolism
and water relations within cuttings have also been
studied and have been found to be important in
determining rooting success. The effect of manipulating
these factors on rooting success is now being examined.
Laboratory modelling of the composting of wood fibre waste has shown wet and dry weight losses
of 30% and 10% respectively. This reduction of
weight and volume will significantly reduce the cost of
water transportation from the mill. Uses of
composted waste such as a mulch for plantation trees, an
organic amendment in mine rehabilitation, a
horticultural potting mix medium and a substrate for
turf production are now being investigated.
Work has been completed on the genetic control
of survival and it's importance in selection traits.
Index selections combining volume per tree and
survival resulted in 10 to 90% greater gains in volume
per hectare than selections based on an index
including only volume per tree alone. The effects of
flowering precocity are currently being examined to
determine the impact of flowering precocity of seed
orchard maintained breeding programs. In the future,
the importance of wood brightness for the
mechanical pulping process will be examined. |